Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790646.1_cds_XP_016502909.1_1564
CDS Infomation

[gene=LOC107821029] [db_xref=GeneID:107821029] [protein=E3 ubiquitin-protein ligase At1g63170-like] [protein_id=XP_016502909.1] [location=join(48875..49449,51222..51341,51419..51551,53914..54078,54182..54358)] [gbkey=CDS]
Sequence

ATGTCCACGGCAAGAGTCGCCGCCGATGACAACACTTCTAACGCCGACATTAGCCCCAGC
GACGGCGGCGGCGGAGTTGATACGTCACCGTTGCTCACCAATTCCCGTAGCCGACGTTCG
TTCCATCGCCGTCCGAGCCTCCGAGGAGCTGCCGGCTTTCTACGGCGCGCAAGCAGCCGC
CGGTTAATGCGCGAGCCATCGATGCGAGTTCGCGAAGCTGCCGCTGAGCAAATCGAGGAG
CGACAAAGCGACTGGGCGTACTCAAAACCTATAGTGATATTAGATCTCATATGGAACTTA
GCTTTTGTTATTGTAGCAATTTCTGTTCTTATAATGAGCAAAAATGAGTCTCCTTCTATG
CCGTTAAGGCTTTGGATTATTGGATACGCTTTACAGTCTGTGCTTCACATGGTTTGTGTG
TTCGTCGAATATAGACGCCGATGTCAGCGACGGAATTCCTCAAGCGGCAGTGGAAATTGG
AATAATAGAGAAGTTTCGAACTTGAGTTCGGAAAGTGATGGAGGAGAGTCTGGTGATTAT
TTACTGGAGAGGCGTCAAAACGAGGACGAAACTAGTGTTGCCAAGCATCTGGAGTCCGCA
AACACCATGTTTTCTTTCATTTGGTGGATAATTGGGTTCTATTGGGTATCTGCTGGTGGC
CAAACTATGACCCGTGATGCACCTCAACTTTACTGGCTTTGTATCACGTTTCTGGCGTTT
GATGTGTTCTTTGTTGTTATATGTGTTGCTGTGGCTTGTGTCATTGGAATTGCTGTTTGC
TGCTGTCTTCCATGTATCATCGCAATCTTATATGCAGTGGCAGATCAGGAAGGAGCAACT
AAGGAAGATGTTGAAAGACTGCCCAAATACAAGTTCCGGAGACTTGGTAACTTCGAGAAA
GAGAGTGGCGAGATTCAAGAATCATTTGGAGGAGTAATGGTTGAATGCGACACTGATACA
CCTACTGAGCATGTTCTTCCACCGGAAGATGCTGAATGTTGCATTTGCCTTTGTTCCTAT
GAAGATGGAGCTGAGCTGCGTGAGCTCCCTTGTCGTCACCATTTTCATGCAGCGTGCATA
GACAAGTGGTTGTATATAAATGCTACCTGTCCTCTTTGCAAGTTCAATATAGTCAAAAAT
GGAAATCAAAGTGGCAGTGAAGAAGCATAA

Peptide Sequence

PEP ID

XP_016502909.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana tabacum]
Sequence

MSTARVAADDNTSNADISPSDGGGGVDTSPLLTNSRSRRSFHRRPSLRGAAGFLRRASSR
RLMREPSMRVREAAAEQIEERQSDWAYSKPIVILDLIWNLAFVIVAISVLIMSKNESPSM
PLRLWIIGYALQSVLHMVCVFVEYRRRCQRRNSSSGSGNWNNREVSNLSSESDGGESGDY
LLERRQNEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQTMTRDAPQLYWLCITFLAF
DVFFVVICVAVACVIGIAVCCCLPCIIAILYAVADQEGATKEDVERLPKYKFRRLGNFEK
ESGEIQESFGGVMVECDTDTPTEHVLPPEDAECCICLCSYEDGAELRELPCRHHFHAACI
DKWLYINATCPLCKFNIVKNGNQSGSEEA

Transcript Sequence

Gene sequence data has not been registered.